| RGAP LOCUS ID |
LOC_Os01g54860 |
| RAP-DB ID |
Os01g0752200 |
| Function |
enoyl-CoA hydratase/isomerase family protein, putative, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
cysk |
| score |
6 |
2) CELLO
Prediction
|
| localization |
Cytoplasmic |
| score |
2.428 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.08 |
4) Y-Loc
Prediction
|
| localization |
Nuclear |
| score |
70.22 |
| confidence value |
0.55 |
| Number Of Software Predicting Nucleus |
1 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
NOG1 |
| Function assigned as per literature |
NOG1 plays a prominent role in increasing grain number |
| Subcellular localization as per literature |
Nucleus and cytoplasm |
| Cells used for localization experiment |
Onion epidermal and rice protoplast cells |
| NUCLEAR or Not Nuclear |
NUCLEAR |
| PMID |
29133783 |
| Reference of localization |
https://www.nature.com/articles/s41467-017-01501-8 |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
0 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.116 |
| NLS score |
-0.47 |
| Protein Sequence |
>LOC_Os01g54860.1 protein
MAEPEQQQQQANPDEVVLGQETGGARVAILNRPRQLNVISDRVVYLLAQFLESWEKDEDAKLVIFKGAGRAFSAGGDLKMFYEGKSDDSCLEVVYRMYWL
CYHIHTYKKTAVALVNGLVMGGGAAMVAPLKFAVVTEKTVFATPEASVGLHTDCSFSYIHSRLPGYLGEYLALTGARLNAKEMIAAGLATHFVPSEKLEE
LEKCLLNLNTGDESAVRAAIEEFSTDVQPDEDSILNKLPTINKCFSAETIEDIIKAFESEGSIDGNQWIATVLKGMRRSSPTSLKMTLRSIREGRKQSLP
ECLKKEFRLTMNTLRSVVTGDVYEGIRALSIDKDNAPKWSPATLEEVKNEDIDRLFEPFSSEKELQVPSDDSNRWSGKFEHTVYGRTSE |
GO Analysis |
| 1 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cellular_component |
|
| 2 |
| GO Category |
Biological Process |
| GO Term |
catabolic process |
|
| 3 |
| GO Category |
Biological Process |
| GO Term |
cellular process |
|
| 4 |
| GO Category |
Biological Process |
| GO Term |
lipid metabolic process |
|
| 5 |
| GO Category |
Biological Process |
| GO Term |
metabolic process |
|
| 6 |
| GO Category |
Biological Process |
| GO Term |
response to abiotic stimulus |
|
| 7 |
| GO Category |
Molecular Function |
| GO Term |
catalytic activity |
|
| 8 |
| GO Category |
Molecular Function |
| GO Term |
hydrolase activity |
|
| Presence of Splice variants |
No |
