LOC_Os01g54810
| RGAP LOCUS ID | LOC_Os01g54810 | ||||
| RAP-DB ID | Os01g0751600 | ||||
| Function | lipase, putative, expressed | ||||
Sub-cellular Localization Predictions |
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1) WoLF-PSORT Prediction |
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| localization | chlo | ||||
| score | 7 | ||||
2) CELLO Prediction |
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| localization | Cytoplasmic | ||||
| score | 2.065 | ||||
3) NUCPRED Prediction |
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| localization | Non Nuclear | ||||
| score | 0.17 | ||||
4) Y-Loc Prediction |
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| localization | Nuclear | ||||
| score | 77.74 | ||||
| confidence value | 0.37 | ||||
| Number Of Software Predicting Nucleus | 1 | ||||
| Seed Specific | No | ||||
| Transcription factor category | |||||
Experimental evidence for subcellular localization |
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| Published gene name (updated 1 January 2020) | THIS1 | ||||
| Function assigned as per literature | THIS1 regulates tillering, plant height, and spikelet fertility in rice | ||||
| Subcellular localization as per literature | Cytoplasm | ||||
| Cells used for localization experiment | Onion epidermal cells | ||||
| NUCLEAR or Not Nuclear | NOT NUCLEAR | ||||
| PMID | 24085578 | ||||
| Reference of localization | https://academic.oup.com/jxb/article/64/14/4389/685062 | ||||
| Is Subcellular localization evidence by author available ? | No | ||||
Sequence Analysis |
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| Number of PAT4 | 0 | ||||
| Number of PAT7 | 0 | ||||
| Number of Bipartite | 0 | ||||
| Basic residues % | 0.122 | ||||
| NLS score | -0.47 | ||||
| Protein Sequence | >LOC_Os01g54810.1 protein MAIDLAPLAGELEVAGAAVGGKKEEGEGEEGGVCGGEAVVVAAADAEVEGHPYDFHVSGPRNLPPPNWREIIRSSWKDPNYKRMVMACFIQAVYLLELDR QDEKGEEDGLAPKWWKPFKYKVTQTLVDERDGSIYGAVLEWDRSSALSDLILIRPSGAPRAVLALRGTLLQKPTIKRDLQDDLRFLVWESLKGSVRYIGA LEALKTAVERFGSANVSVAGHSLGAGFALQVCKELAKQGVFVECHLFNPPSVSLAMGVRSMSEKASYLWKKVKASLPLTEEALPDSTKEEGSAKKKLRAD KKWVPHLYVNNSDYICCHYNAPNCSTTTTTTTTDGASDEQQQQRKASEIAGDVVAKLFVTSKGPQKFLEAHGLEQWWSDGMELQLAVYDSKLIYRQLKSL YTATAPSPPAK |
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GO Analysis |
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| 1 |
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| Presence of Splice variants | No | ||||