LOC_Os01g53930

Expression Profile

RGAP LOCUS ID LOC_Os01g53930
RAP-DB ID Os01g0742500
Function hexokinase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 12

2) CELLO Prediction
localization Cytoplasmic
score 1.466

3) NUCPRED Prediction
localization Non Nuclear
score 0.28

4) Y-Loc Prediction
localization Cytoplasm
score 43
confidence value 0.01
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsHXK6
Function assigned as per literature can function as Glucose sensor
Subcellular localization as per literature predominantly localized in mitochondria. Deletion of N-terminal mitochondrial targeting peptides resulted in nuclear localization
Cells used for localization experiment rice protoplast cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 19010999
Reference of localization http://www.plantphysiol.org/content/149/2/745#sec-6
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 0
Number of Bipartite 2
Basic residues % 0.115
NLS score 1.3
Protein Sequence >LOC_Os01g53930.1 protein
MGKGTVVGTAVVVCAAAAAAVGVAVVVSRRRRSKREAEEERRRRAAAVIEEVEQRFSTPTALLRGIADAMVEEMERGLRADPHAPLKMLISYVDNLPTGD
EHGLFYALDLGGTNFRVIRVQLGGREKRVVSQQYEEVAIPPHLMVGTSMELFDFIAAELESFVKTEGEDFHLPEGRQRELGFTFSFPVHQTSISSGTLIK
WTKGFSINGTVGEDVVAELSRAMERQGLDMKVTALVNDTVGTLAGGRYVDNDVAAAVILGTGTNAAYVEHANAIPKWTGLLPRSGNMVINMEWGNFKSER
LPRSDYDNALDFESLNPGEQIYEKMISGMYLGEIVRRILLKLAHDASLFGDVVPTKLEQRFILRTPDMSAMHHDTSHDLKHLGAKLKDILGVADTSLEAR
YITLHVCDLVAERGARLAAAGIYGILKKLGRDRVPSDGSQKQRTVIALDGGLYEHYKKFRTCLEATLADLLGEEAASSVVVKLANDGSGIGAALLAASHS
QYASVE

GO Analysis
1
GO Category Biological Process
GO Term cellular homeostasis
2
GO Category Biological Process
GO Term signal transduction
3
GO Category Cellular comBiological Processonent
GO Term membrane
4
GO Category Molecular Function
GO Term nucleotide binding
5
GO Category Molecular Function
GO Term protein binding
6
GO Category Molecular Function
GO Term binding
7
GO Category Cellular comBiological Processonent
GO Term mitochondrion
8
GO Category Cellular comBiological Processonent
GO Term nucleus
9
GO Category Biological Process
GO Term carbohydrate metabolic process
10
GO Category Biological Process
GO Term cellular process
11
GO Category Molecular Function
GO Term kinase activity
12
GO Category Cellular comBiological Processonent
GO Term vacuole
13
GO Category Biological Process
GO Term catabolic process
14
GO Category Biological Process
GO Term cell death
15
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants YES