LOC_Os01g52050

Expression Profile

RGAP LOCUS ID LOC_Os01g52050
RAP-DB ID Os01g0718300
Function systemin receptor SR160 precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 10

2) CELLO Prediction
localization PlasmaMembrane
score 1.253

3) NUCPRED Prediction
localization Non Nuclear
score 0.61

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.11
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) D61|OsBRI1
Function assigned as per literature OsBRI1 is involved in brassinosteroid signaling and regulates rice growth and development
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment Rice protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 28402719
Reference of localization https://www.tandfonline.com/doi/full/10.1080/15592324.2016.1257455
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 1
Basic residues % 0.087
NLS score 0.33
Protein Sequence >LOC_Os01g52050.1 protein
MDSLWAAIAALFVAAAVVVRGAAAADDAQLLEEFRQAVPNQAALKGWSGGDGACRFPGAGCRNGRLTSLSLAGVPLNAEFRAVAATLLQLGSVEVLSLRG
ANVSGALSAAGGARCGSKLQALDLSGNAALRGSVADVAALASACGGLKTLNLSGDAVGAAKVGGGGGPGFAGLDSLDLSNNKITDDSDLRWMVDAGVGAV
RWLDLALNRISGVPEFTNCSGLQYLDLSGNLIVGEVPGGALSDCRGLKVLNLSFNHLAGVFPPDIAGLTSLNALNLSNNNFSGELPGEAFAKLQQLTALS
LSFNHFNGSIPDTVASLPELQQLDLSSNTFSGTIPSSLCQDPNSKLHLLYLQNNYLTGGIPDAVSNCTSLVSLDLSLNYINGSIPASLGDLGNLQDLILW
QNELEGEIPASLSRIQGLEHLILDYNGLTGSIPPELAKCTKLNWISLASNRLSGPIPSWLGKLSYLAILKLSNNSFSGPIPPELGDCQSLVWLDLNSNQL
NGSIPKELAKQSGKMNVGLIVGRPYVYLRNDELSSECRGKGSLLEFTSIRPDDLSRMPSKKLCNFTRMYVGSTEYTFNKNGSMIFLDLSYNQLDSAIPGE
LGDMFYLMIMNLGHNLLSGTIPSRLAEAKKLAVLDLSYNQLEGPIPNSFSALSLSEINLSNNQLNGTIPELGSLATFPKSQYENNTGLCGFPLPPCDHSS
PRSSNDHQSHRRQASMASSIAMGLLFSLFCIIVIIIAIGSKRRRLKNEEASTSRDIYIDSRSHSATMNSDWRQNLSGTNLLSINLAAFEKPLQNLTLADL
VEATNGFHIACQIGSGGFGDVYKAQLKDGKVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKAGEERLLVYDYMKFGSLEDVLHDRKKIGK
KLNWEARRKIAVGAARGLAFLHHNCIPHIIHRDMKSSNVLIDEQLEARVSDFGMARLMSVVDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVVL
LELLTGKPPTDSADFGEDNNLVGWVKQHTKLKITDVFDPELLKEDPSVELELLEHLKIACACLDDRPSRRPTMLKVMAMFKEIQAGSTVDSKTSSAAAGS
IDEGGYGVLDMPLREAKEEKD

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term protein binding
4
GO Category Biological Process
GO Term flower development
5
GO Category Biological Process
GO Term response to endogenous stimulus
6
GO Category Molecular Function
GO Term kinase activity
7
GO Category Cellular comBiological Processonent
GO Term plasma membrane
8
GO Category Molecular Function
GO Term lipid binding
9
GO Category Biological Process
GO Term biological_process
10
GO Category Biological Process
GO Term cellular component organization
11
GO Category Biological Process
GO Term anatomical structure morphogenesis
12
GO Category Biological Process
GO Term cell growth
13
GO Category Biological Process
GO Term protein modification process
14
GO Category Biological Process
GO Term signal transduction
15
GO Category Biological Process
GO Term response to abiotic stimulus
16
GO Category Biological Process
GO Term cell differentiation
17
GO Category Cellular comBiological Processonent
GO Term endosome
18
GO Category Cellular comBiological Processonent
GO Term cellular_component
19
GO Category Biological Process
GO Term multicellular organismal development
Presence of Splice variants No