LOC_Os01g50820

Expression Profile

RGAP LOCUS ID LOC_Os01g50820
RAP-DB ID Os01g0704100
Function transporter, major facilitator family, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 6

2) CELLO Prediction
localization PlasmaMembrane
score 4.715

3) NUCPRED Prediction
localization Non Nuclear
score 0.03

4) Y-Loc Prediction
localization Cytoplasm
score 88
confidence value 0.52
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsNRT2.3
Function assigned as per literature OsNRT2.3a plays a key role in long-distance nitrate transport from root to shoot at low nitrate supply level in rice.
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment Rice protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 23093362
Reference of localization http://www.plantphysiol.org/content/160/4/2052.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.072
NLS score -0.47
Protein Sequence >LOC_Os01g50820.1 protein
MEAKPVAMEVEGVEAAGGKPRFRMPVDSDLKATEFWLFSFARPHMASFHMAWFSFFCCFVSTFAAPPLLPLIRDTLGLTATDIGNAGIASVSGAVFARLA
MGTACDLVGPRLASASLILLTTPAVYCSSIIQSPSGYLLVRFFTGISLASFVSAQFWMSSMFSAPKVGLANGVAGGWGNLGGGAVQLLMPLVYEAIHKIG
STPFTAWRIAFFIPGLMQTFSAIAVLAFGQDMPGGNYGKLHKTGDMHKDSFGNVLRHALTNYRGWILALTYGYSFGVELTIDNVVHQYFYDRFDVNLQTA
GLIAASFGMANIISRPGGGLLSDWLSSRYGMRGRLWGLWTVQTIGGVLCVVLGIVDFSFAASVAVMVLFSFFVQAACGLTFGIVPFVSRRSLGLISGMTG
GGGNVGAVLTQYIFFHGTKYKTETGIKYMGLMIIACTLPVMLIYFPQWGGMLVGPRKGATAEEYYSREWSDHEREKGFNAASVRFAENSVREGGRSSANG
GQPRHTVPVDASPAGV

GO Analysis
1
GO Category Molecular Function
GO Term transporter activity
2
GO Category Biological Process
GO Term transport
3
GO Category Biological Process
GO Term cellular process
4
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No