LOC_Os01g50760

Expression Profile

RGAP LOCUS ID LOC_Os01g50760
RAP-DB ID Os01g0703400
Function polyprenyl synthetase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 10.5

2) CELLO Prediction
localization Cytoplasmic
score 3.666

3) NUCPRED Prediction
localization Non Nuclear
score 0.04

4) Y-Loc Prediction
localization Cytoplasm
score 99
confidence value 0.66
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsFPPS1|FPPS1|FPPS
Function assigned as per literature FPPS1 may play a role in isoprenoid synthesis
Subcellular localization as per literature Chloroplast
Cells used for localization experiment Rice leaves
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 10353221
Reference of localization https://academic.oup.com/pcp/article/40/3/348/1891622
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.113
NLS score -0.47
Protein Sequence >LOC_Os01g50760.1 protein
MAAAVVANGASGDSSKAAFAEIYSRLKEEMLEDPAFEFTDESLQWIDRMLDYNVLGGKCNRGISVIDSFKMLKGTDVLNKEETFLACTLGWCIEWLQAYF
LVLDDIMDNSQTRRGQPCWFRVPQVGLIAVNDGIILRNHISRILQRHFKGKLYYVDLIDLFNEVEFKTASGQLLDLITTHEGEKDLTKYNLTVHRRIVQY
KTAYYSFYLPVACALLLSGENLDNFGDVKNILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADENQKHILFENYGKPDPECVAK
VKDLYKELNLEAVFHEYERESYNKLIADIEAHPNKAVQNVLKSFLHKIYKRQK

GO Analysis
1
GO Category Biological Process
GO Term biosynthetic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Biological Process
GO Term lipid metabolic process
4
GO Category Molecular Function
GO Term transferase activity
5
GO Category Biological Process
GO Term metabolic process
6
GO Category Cellular comBiological Processonent
GO Term cytosol
Presence of Splice variants No