LOC_Os01g47530

Expression Profile

RGAP LOCUS ID LOC_Os01g47530
RAP-DB ID Os01g0665200
Function CGMC_MAPKCMGC_2.6 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 8

2) CELLO Prediction
localization Nuclear
score 2.696

3) NUCPRED Prediction
localization Non Nuclear
score 0.66

4) Y-Loc Prediction
localization Nuclear
score 80.73
confidence value 0.74
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsMPK8|OsWJUMK1
Function assigned as per literature OsMPK8 plays role in the signaling network
Subcellular localization as per literature Nucleus and cytoplasm
Cells used for localization experiment Onion epidermal cells and root cells of the transgenic plants
NUCLEAR or Not Nuclear NUCLEAR
PMID 22786887
Reference of localization http://www.plantphysiol.org/content/160/1/477
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.144
NLS score -0.47
Protein Sequence >LOC_Os01g47530.1 protein
MAMQTMQTEQQQQQRRKGSPEMDFFSEYGDANRYKIQEVIGKGSYGVVCSAIDQHTGDKVAIKKIHNIFEHLSDAARILREIKLLRLLRHPDIVEIKHIM
LPPSRRDFKDIYVVFELMDTDLHQVIKANDDLTKEHHQFFLYQMLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTVFWTDYVA
TRWYRAPELCGSFFTKYSPAIDIWSIGCIFAEILTGKPLFPGKNVVHQLDLMTDLLGTPSMDTVTRIRNEKARRYLSSMRKKQPVPFSERFPKADPAALK
LLQRLLAFDPKDRPTAEEALADPYFKGLAKAEREPSCQPITKMEFEFERRKVTKEDVKELIFREILEYHPQLLKDYMNGTEKTNFLYPSALDNFRRQFAN
LEENGGKNGDAVPSDRKHVSLPRTTTVHSAPIPPKDHQNITSQVPQRIPGRTGRGACPVIPFENLSAMGPYNQRRVVRNPVLPPATTNLSAYAYHRKSDS
SERELQQELEKDRMRYQPSEHFMDAKVVSHMSHDLRASSYYVSKAKSDVADRAALQSNMMQGIGPFNGIAAVGGNYNKVSTVQYGVSRMY

GO Analysis
1
GO Category Biological Process
GO Term signal transduction
2
GO Category Molecular Function
GO Term protein binding
3
GO Category Biological Process
GO Term protein modification process
4
GO Category Molecular Function
GO Term kinase activity
5
GO Category Molecular Function
GO Term signal transducer activity
Presence of Splice variants YES