LOC_Os01g47340

Expression Profile

RGAP LOCUS ID LOC_Os01g47340
RAP-DB ID Os01g0662600
Function iron-sulfur cluster assembly enzyme ISCU, mitochondrial precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 6

2) CELLO Prediction
localization Cytoplasmic
score 1.576

3) NUCPRED Prediction
localization Non Nuclear
score 0

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.63
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsIsu1
Function assigned as per literature OsIsu is a scaffold protein involved in mitochondrial iron-sulfur-cluster biogenesis
Subcellular localization as per literature Mitochondria
Cells used for localization experiment onion epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 19396402
Reference of localization https://link.springer.com/article/10.1007/s10529-009-0004-7
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.14
NLS score -0.47
Protein Sequence >LOC_Os01g47340.1 protein
MLRAGGRRLLAPGLRRVLGGGAAAPVAVGGAKAYHERVVDHYENPRNVGSFENDDPSVGTGLVGAPACGDVMKLQIRVDESSGKIVDACFKTFGCGSAIA
SSSVATEWVKGKQMEEVVTIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKKAKLAQKGEEKAAEA

GO Analysis
1
GO Category Biological Process
GO Term biosynthetic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term structural molecule activity
4
GO Category Cellular comBiological Processonent
GO Term mitochondrion
Presence of Splice variants YES