LOC_Os01g45990

Expression Profile

RGAP LOCUS ID LOC_Os01g45990
RAP-DB ID Os01g0648000
Function potassium channel AKT1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 11

2) CELLO Prediction
localization PlasmaMembrane
score 3.815

3) NUCPRED Prediction
localization Non Nuclear
score 0.34

4) Y-Loc Prediction
localization Chloroplast
score 5
confidence value 0.31
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsAKT1
Function assigned as per literature Os-AKT1 is involved in potassium uptake in rice and in its regulatory mechanism
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment Nicotiana benthamian leaves
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 25096783
Reference of localization http://www.plantcell.org/content/26/8/3387.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 3
Number of Bipartite 0
Basic residues % 0.108
NLS score 0.7
Protein Sequence >LOC_Os01g45990.1 protein
MARWGAARMAACGPWGRNRRVGAGDAFEASEVRRDGRSRMMPACGPWGAGHGGGDPALERELSRDGSHYSISSAILPSLGARSNRRIKLRRFIISPYDRR
YRIWETFLIVLVVYSAWVSPFEFGFIPKPTGALATADNVVNAFFAVDIILTFFVAYLDKMSYMLEDDPKKIAWRYSTTWLVLDVASTIPSEFARRILPSK
LRSYGFFNMLRLWRLRRVSSLFSRLEKDRHFNYFWVRCAKLICVTLFAVHCAACFYYLLADRYPVPTSTWIGNYMADFHERSLWIRYVTSVYWSITTLTT
VGYGDLHAENTREMIFNIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRNYRDTIQAATSFGVRNQLPPRLQDQMISHISLKYRTDSEGLQQQEILDSLPKA
IKSSISQYLFFHLVQNVYLFQGVSNDLIFQLVSEMKAEYFPPREDVILQNEAPTDFYILVSGSVELVEQQNGADQVIQVATSGEVVGEIGVLCYRPQLFT
VRTRSLCQLLRLNRTAFLSIVQSNVGDGTIIMNNLIQFLKEQKENSVMAGVVKEIESMLARGNLDLPITLCFAVTRGDDFLLHQLLKRGMDPNESDNDGH
TALHIAASKGNEQCVRLLLEYGADPNARDSEGKVPLWEALCEKHAAVVQLLVEGGADLSSGDTGLYACIAVEESDTELLNDIIHYGGDVNRARRDGTTAL
HRAVCDGNVQMAELLLEHGADIDKQDGNGWTPRALAEQQGHDDIQLLFRSRKAATASGHHHVPSSTTTRVAPAAAAASLIGRFNSEPMMKNMIHEDADLP
SRVLPEKLRRKRVTFQNSLFGVISSSQAQRETDHPLSRGGLAATGSPNPSSGSRNAVIRVTISCPEKGNTAGKLVLLPQTLDMLLELGAKKFDFAPTKVL
TVEGAEVDEVELIRDGDHLVLVSNEWDAEKMKGKS

GO Analysis
1
GO Category Biological Process
GO Term transport
2
GO Category Molecular Function
GO Term nucleotide binding
3
GO Category Molecular Function
GO Term transporter activity
4
GO Category Biological Process
GO Term cellular process
5
GO Category Biological Process
GO Term anatomical structure morphogenesis
6
GO Category Biological Process
GO Term cell differentiation
7
GO Category Biological Process
GO Term multicellular organismal development
8
GO Category Biological Process
GO Term cell growth
9
GO Category Molecular Function
GO Term protein binding
10
GO Category Biological Process
GO Term response to stress
11
GO Category Biological Process
GO Term response to abiotic stimulus
12
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No