LOC_Os01g45760

Expression Profile

RGAP LOCUS ID LOC_Os01g45760
RAP-DB ID Os01g0645400
Function YUC4, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 6

2) CELLO Prediction
localization Mitochondrial
score 1.328

3) NUCPRED Prediction
localization Non Nuclear
score 0.02

4) Y-Loc Prediction
localization Nuclear
score 71.87
confidence value 0.26
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsYUCCA1|OsYUC1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.121
NLS score -0.22
Protein Sequence >LOC_Os01g45760.1 protein
MDNKPAQERRETWVPGAVIVGAGPSGLAAAACLAARGVPATVLERSDSLASTWRHRMYDRLALHLPKRFCELPLLPFPEEYPTYPSKDQFVAYMEAYAAA
AGVAPRFGATVEEAAFDAAVGAWRVRLDGGEVLMARWLVVATGENAEPRVPDFPGMQKFAGCAMHTSEYKSGEQFAGKKVLVVGCGNSGMEVSLDLCRHG
AKPSMVVRNTVHVLPREMFGLSTFGIAMALLRWLPVQLVDRFLLTAAHLILGNTGQFGLRRPKTGPIELKNLTGRTPVLDVGTLDHIKSGKIKVVGAVKE
MTRQGVRFTDGKEEQFDTIILATGYRSNVPSWLKDAGDLFTREGISKVPFPNSWRGRNGLYTVGFTQRGLLGTSSDALNVAKDIHCQWRERDRSAINVLE
ISNSSF

GO Analysis
1
GO Category Biological Process
GO Term multicellular organismal development
2
GO Category Biological Process
GO Term reproduction
3
GO Category Biological Process
GO Term post-embryonic development
4
GO Category Biological Process
GO Term embryo development
5
GO Category Molecular Function
GO Term binding
6
GO Category Biological Process
GO Term metabolic process
7
GO Category Biological Process
GO Term biosynthetic process
8
GO Category Biological Process
GO Term cellular process
9
GO Category Biological Process
GO Term anatomical structure morphogenesis
10
GO Category Biological Process
GO Term flower development
11
GO Category Molecular Function
GO Term nucleotide binding
12
GO Category Molecular Function
GO Term catalytic activity
Presence of Splice variants YES