LOC_Os01g45750

Expression Profile

RGAP LOCUS ID LOC_Os01g45750
RAP-DB ID Os01g0645200
Function bile acid sodium symporter family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 11.5

2) CELLO Prediction
localization PlasmaMembrane
score 4.945

3) NUCPRED Prediction
localization Non Nuclear
score 0.02

4) Y-Loc Prediction
localization Chloroplast
score 6
confidence value 0.17
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) Ossbf1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.072
NLS score -0.47
Protein Sequence >LOC_Os01g45750.1 protein
MAASTTCPARSMASVSRALRPRPHAAIASAAVRTAARLGGGLGIVCSMPSYGRKEKEEWGLTIASAPATTAAPALRSCQLLCKAEANISSNLPESIPSEA
NQYEKIVELLTTLFPVWVILGTIIGIYKPSMVTWLETDLFTVGLGFLMLSMGLTLTFEDFRRCMRNPWTVGVGFLAQYLIKPMLGFAIAMTLKLSAPLAT
GLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAISTFQVVLLPTIVGVLAHEYFPKFTERIISITPLIGV
LLTTLLCASPIGQVSEVLKAQGGQLIIPVALLHVAAFALGYWLSKVSSFGESTSRTISIECGMQSSALGFLLAQKHFTNPLVAVPSAVSVVCMALGGSAL
AVFWRNRGLPANDKDDFKE

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Biological Process
GO Term transport
3
GO Category Biological Process
GO Term cellular process
4
GO Category Molecular Function
GO Term transporter activity
5
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No