LOC_Os01g45200

Expression Profile

RGAP LOCUS ID LOC_Os01g45200
RAP-DB ID Os01g0639200
Function cinnamoyl-CoA reductase-related, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 10

2) CELLO Prediction
localization Mitochondrial
score 1.421

3) NUCPRED Prediction
localization Non Nuclear
score 0.27

4) Y-Loc Prediction
localization Cytoplasm
score 80
confidence value 0.35
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) Snl6
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.132
NLS score -0.13
Protein Sequence >LOC_Os01g45200.1 protein
MRAALLHGHGGGAAAAAAAGWRPSAGDADVKRTAGGDGGAAGPRTVCVTGGISFVGFAVVDRLLRHGYTVRLALETQEDLDKLREMEMFGEDGRDGVWTV
MANVTDPESLHRAFDGCAGVFHTSAFVDPGGMSGYTKHMASLEAKAAEQVIEACVRTESVRKCVFTSSLLACVWRQNYPHDRRFPTIIDENCWSDESFCR
DNKLWFALGKTAAEKTAWRAARGRDLKLVTVCPALVTGPGFRRRNSTASIAYLKGARAMLADGLLATASVETVAEAHVRVYEAMGDNTAGGRYICYDHVV
KRPEEFAELERQLGIPRRAAAAAAAQDSGDRPARFDLCRQKLARLMSTRRRCTYDDYYSVAFD

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Molecular Function
GO Term catalytic activity
4
GO Category Molecular Function
GO Term binding
5
GO Category Biological Process
GO Term biosynthetic process
6
GO Category Biological Process
GO Term cellular process
7
GO Category Biological Process
GO Term secondary metabolic process
Presence of Splice variants No