LOC_Os01g44980

Expression Profile

RGAP LOCUS ID LOC_Os01g44980
RAP-DB ID Os01g0636600
Function peptide deformylase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 8

2) CELLO Prediction
localization Cytoplasmic
score 2.935

3) NUCPRED Prediction
localization Non Nuclear
score 0

4) Y-Loc Prediction
localization Cytoplasm
score 97
confidence value 0.68
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPDF1B2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.124
NLS score -0.47
Protein Sequence >LOC_Os01g44980.1 protein
MFDVMYKTDGIGLSAPQVGVNVQLMVFNPAGVKGEGEEIVLVNPVVYKMSKRLLVYEESCLSFPGIYANVVRPDNVKIDAQDVTGAKIKVKLSGLSARVF
QHEFDHLQGILFFDRMSLDVLESVREGLKDLEKKYEESTGLVSPESIENYKGRKDLISFSR

GO Analysis
1
GO Category Molecular Function
GO Term hydrolase activity
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Biological Process
GO Term translation
4
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No