LOC_Os01g44220

Expression Profile

RGAP LOCUS ID

LOC_Os01g44220

RAP-DB ID

Os01g0633100

Function

glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction

localization

cyto

score

2) CELLO Prediction

localization

Chloroplast

score

2.455

3) NUCPRED Prediction

localization

Non Nuclear

score

0.14

4) Y-Loc Prediction

localization

Chloroplast

score

confidence value

0.5

Number Of Software Predicting Nucleus

Seed Specific

Transcription factor category

Experimental evidence for subcellular localization

Published gene name (updated 1 January 2020)

OsAPL2|osagpl2-3|OsAGPL2|GIF2

Function assigned as per literature

OsAGPL2 encodes large subunit of the enzyme ADP-glucose pyrophosphorylase (AGP) and may play an essential for starch synthesis in the seed endosperm of rice

Subcellular localization as per literature

Cytosol

Cells used for localization experiment

Rice leaf

NUCLEAR or Not Nuclear

NOT NUCLEAR

PMID

17406793

Reference of localization

https://link.springer.com/article/10.1007%2Fs11103-007-9153-z

Is Subcellular localization evidence by author available ?

Sequence Analysis

Number of PAT4

Number of PAT7

Number of Bipartite

Basic residues %

0.102

NLS score

-0.47

Protein Sequence

>LOC_Os01g44220.2 protein
MQFMMPLDTNACAQPMRRAGEGAGTERLMERLNIGGMTQEKALRKRCFGDGVTGTARCVFTSDADRDTPHLRTQSSRKNYADASHVSAVILGGGTGVQLF
PLTSTRATPAVPVGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHHTYLGGGINFTDGSVQVLAATQMPDEPAGWFQGTADAIRKFMWILEDHY
NQNNIEHVVILCGDQLYRMNYMELVQKHVDDNADITISCAPIDGSRASDYGLVKFDDSGRVIQFLEKPEGADLESMKVDTSFLSYAIDDKQKYPYIASMG
IYVLKKDVLLDILKSKYAHLQDFGSEILPRAVLEHNVKACVFTEYWEDIGTIKSFFDANLALTEQPPKFEFYDPKTPFFTSPRYLPPARLEKCKIKDAII
SDGCSFSECTIEHSVIGISSRVSIGCELKDTMMMGADQYETEEETSKLLFEGKVPIGIGENTKIRNCIIDMNARIGRNVIIANTQGVQESDHPEEGYYIR
SGIVVILKNATIKDGTVI

GO Analysis

GO Category	Biological Process
GO Term	biosynthetic process

GO Category	Biological Process
GO Term	carbohydrate metabolic process

GO Category	Biological Process
GO Term	cellular process

GO Category	Cellular comBiological Processonent
GO Term	cellular_component

GO Category	Biological Process
GO Term	metabolic process

GO Category	Molecular Function
GO Term	transferase activity

Presence of Splice variants

YES