LOC_Os01g43650

Expression Profile

RGAP LOCUS ID LOC_Os01g43650
RAP-DB ID Os01g0626400
Function WRKY11, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 14

2) CELLO Prediction
localization Nuclear
score 4.6

3) NUCPRED Prediction
localization Non Nuclear
score 0.56

4) Y-Loc Prediction
localization Nuclear
score 99.98
confidence value 0.99
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category WRKY

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsWRKY11
Function assigned as per literature Dlf1 is involved in the control of flowering time and plant height in rice
Subcellular localization as per literature Nucleus
Cells used for localization experiment Onion epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 25036785
Reference of localization http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0102529
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 2
Number of Bipartite 0
Basic residues % 0.092
NLS score 0.8
Protein Sequence >LOC_Os01g43650.1 protein
MSSGGGGGGGGDRHGPYHQHGHLGRGEGADYVYSSSDMESFFFSQPGGVGIGGGGGGVVGAGGADEIMPYSSITDYLQGLLDPSGLARHLDVACPSSQDT
VVKQELSVDVTSHDSQGTGGVAGEGVAQATPNSSASFSSSDGEAEGGKSSRRCKKGQAKAEEEDDKDEEDGENSKKPNKPKKKAEKRQRQPRVAFLTKSE
VDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTPKCGVKKRVERSYQDPSTVITTYEGQHTHHSPASLRGGGGGVGIVGGHHHHHLFMPGVHGLPPSHLMP
AGFHPELMGLMHHHPAMAAAAANPSMYFPGVAASAPPPPAVAGGGAMPPNDHPPLQQHHFTDYALLQDLFPSTMPSSNP

GO Analysis
1
GO Category Biological Process
GO Term biosynthetic process
2
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
3
GO Category Molecular Function
GO Term sequence-specific DNA binding transcription factor activity
Presence of Splice variants YES