LOC_Os01g40094

Expression Profile

RGAP LOCUS ID LOC_Os01g40094
RAP-DB ID Os01g0583100
Function protein phosphatase 2C, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization vacu
score 11

2) CELLO Prediction
localization Chloroplast
score 2.666

3) NUCPRED Prediction
localization Non Nuclear
score 0.09

4) Y-Loc Prediction
localization Cytoplasm
score 86
confidence value 0.3
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsABI2|OsPP2C06|OsABIL1
Function assigned as per literature OsABIL2 has important in regulating root development
Subcellular localization as per literature Nucleus
Cells used for localization experiment N. benthamiana pavement cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 26491145
Reference of localization https://academic.oup.com/pcp/article/56/12/2396/2755915
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.094
NLS score -0.47
Protein Sequence >LOC_Os01g40094.1 protein
MEDVAVAAALAPAPATAPVFSPAAAGLTLIAAAAADPIAAVVAGAMDGVVTVPPVRTASAVEDDAVAPGRGEEGGEASAVGSPCSVTSDCSSVASADFEG
VGLGFFGAAADGGAAMVFEDSAASAATVEAEARVAAGARSVFAVECVPLWGHKSICGRRPEMEDAVVAVSRFFDIPLWMLTGNSVVDGLDPMSFRLPAHF
FGVYDGHGGAQVANYCRERLHAALVEELSRIEGSVSGANLGSVEFKKKWEQAFVDCFSRVDEEVGGNASRGEAVAPETVGSTAVVAVICSSHIIVANCGD
SRAVLCRGKQPVPLSVDHKPNREDEYARIEAEGGKVIQWNGYRVFGVLAMSRSIGDRYLKPWIIPVPEITIVPRAKDDECLVLASDGLWDVMSNEEVCDV
ARKRILLWHKKNGTNPASAPRSGDSSDPAAEAAAECLSKLALQKGSKDNISVIVVDLKAHRKFKSKS

GO Analysis
1
GO Category Biological Process
GO Term protein modification process
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Biological Process
GO Term cellular process
4
GO Category Molecular Function
GO Term catalytic activity
5
GO Category Molecular Function
GO Term hydrolase activity
Presence of Splice variants No