LOC_Os01g36550

Expression Profile

RGAP LOCUS ID LOC_Os01g36550
RAP-DB ID Os01g0546000
Function protein kinase family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 3

2) CELLO Prediction
localization Cytoplasmic
score 1.457

3) NUCPRED Prediction
localization Non Nuclear
score 0.09

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.27
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsLYK1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID 30410018
Reference of localization https://www.nature.com/articles/s41467-018-06865-z
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.098
NLS score -0.47
Protein Sequence >LOC_Os01g36550.1 protein
MSKHGFLFFLLFFVQHLHTIISLLDSPGGSLASLPEWQPMPCKSVSVNPLCSSYLYVTPEGRNLSKVASDFSGNASLFQRITRLSGSEDLLVNVPCVCEA
INATMTGLFHDTNYRVKDGDMGDIINSKTFSGLALNVGDGQILHKEEKLIIHLPCGCSSTAPEGVLSYAVQDGDTLGNIASLFRSSWKDILDLNPRVANP
DFIKPGWILFIPMGVAGPSNKKIDPFQTERPVIFSLRAIEDATSNFDEKRKIGEGGYGSVYLGFIGTHEIAVKKMKASKSKEFFAELKVLCKIHHINVVE
LIGYAAGDDHLYLVYEYVQNGSLSEHLHDPLLKGHQPLSWTARTQIAMDSARGIEYIHDHTKTCYVHRDIKTSNILLDNGLRAKVADFGLVKLVQRSDED
ECLATRLVGTPGYLPPESVLELHMTTKSDVYAFGVVLAELITGLRALVRDNKEANKTKSLISIMRKAFKPEDLESSLETIVDPYLKDNYPIEEVCKLANI
SMWCLSEDPLHRPEMREVMPILAQIHMASIEWEASLGGDGEVFSGVSNGR

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Biological Process
GO Term cellular process
4
GO Category Biological Process
GO Term catabolic process
5
GO Category Molecular Function
GO Term kinase activity
6
GO Category Biological Process
GO Term protein modification process
Presence of Splice variants No