LOC_Os01g33040

Expression Profile

RGAP LOCUS ID LOC_Os01g33040
RAP-DB ID Os01g0513900
Function kinesin motor domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 8

2) CELLO Prediction
localization Nuclear
score 3.52

3) NUCPRED Prediction
localization Nuclear
score 0.87

4) Y-Loc Prediction
localization Cytoplasm
score 59
confidence value 0.1
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) DBS1|OsNACK
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 2
Number of Bipartite 1
Basic residues % 0.147
NLS score 1.42
Protein Sequence >LOC_Os01g33040.1 protein
MGVSRPPSTPASKIERTPMSTPTPGGSTRVKEEKIFVTVRVRPLSKKELALKDQVAWECDDNQTILYKGPPQDRAAPTSYTFDKVFGPASQTEVVYEEGA
KDVAMSALTGINATIFAYGQTSSGKTFTMRGVTESAVNDIYRHIENTPERDFIIKISAMEIYNEIVKDLLRPESTNLRLLDDPEKGTIVEKLEEEIAKDS
QHLRHLISICEEQRQVGETALNDTSSRSHQIIRLTVESRLREVSGCVKSFVANLNFVDLAGSERAAQTHAVGARLKEGCHINRSLLTLTTVIRKLSSDKR
SGHIPYRDSKLTRILQLSLGGNARTAIICTMSPAQTHVEQSRNTLFFATCAKEVTNNAKVNMVVSDKQLVKHLQMEVARLEAELRTPDRASSSEIIIMER
DRKIRQMEKEMEELKKQRDNAQLKLEELQKKMGDNQPGWNPFDSPQRTRKCLTYSGSLQPSNKMKIRSSIRQSATAPFMLKHEIRKLEQLQQQLEVEANR
AIEVLHKEVECHKHGNQDAAETIAKLQAEIRGMQSVRSDRDVDMITDEGNGSDLKEEISRLHMQDNDIAKLEAKLENVQRSIDRLVMSLPNVGTQCNETT
PKSNRAKKKKRMLLPLGVSNINRPNLIRAPCSPLSSSRPLEPEVENRAPEGDTVSHEGSERATPTKSEDTGDVSSRDETPRYRRSSSVNMKKMQKMFQNA
AEENVRNIRAYVTELKERVAKLQYQKQLLVCQVLELESNEGKTNDMEEDSEENAGSLQDGPDSWDRLFKEQMQHIIQLWDLCHVSIIHRTQFYLLFRGDR
ADQIYIEVEVRRLTWLQQHFAEVGDASPAAGDDSTISLASSIKALRNEREFLARRMGSRLTEEERERLFIKWQVPLEAKQRKLQLVNRLWTDPNDQAHID
ESADIVARLVGFCEGGNISKEMFELNFAVPASRKPWLMGWQPISNMIREKTQLW

GO Analysis
1
GO Category Biological Process
GO Term cell cycle
2
GO Category Biological Process
GO Term multicellular organismal development
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Cellular comBiological Processonent
GO Term cellular_component
5
GO Category Biological Process
GO Term cellular process
6
GO Category Biological Process
GO Term anatomical structure morphogenesis
7
GO Category Molecular Function
GO Term motor activity
8
GO Category Biological Process
GO Term cellular component organization
Presence of Splice variants No