LOC_Os01g28474

Expression Profile

RGAP LOCUS ID LOC_Os01g28474
RAP-DB ID Os01g0382200
Function transferase family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 10

2) CELLO Prediction
localization PlasmaMembrane
score 1.741

3) NUCPRED Prediction
localization Non Nuclear
score 0.02

4) Y-Loc Prediction
localization Cytoplasm
score 47
confidence value 0.13
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) AL1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.085
NLS score -0.47
Protein Sequence >LOC_Os01g28474.1 protein
MEIVGECIYNNPPVLVTPSKPTPKLALYLSNLDDQRLLHFPIQYIYVFTGTLDMDTLKVALSRVLVDYYPLAGRLRASNEHDGKLIIDCNSEGVLFAEGF
LPGLTAGDFILGHAKPHKSWKKLLYKDEQSFVCTPPLVVQVTHLSCGGTILCTAIAHCVSDAFGAAHFLRAWARAAMSEDSELAHPAVAPCHDRRALAPR
CTPRIAFAHPEYTAASGGDDASAVAEASSRLFAPPLSPVSVTFTAAHVARLKKLYAPSASPLEQCTSFEALAAHVWRAWVRALDPPASLPIKLLFTMGIR
RLVKPELSGGCYCGNGFVLACAESTAGQLAASAPDAARLVQETKQRVDDDYVRSVIDLLEVRRGCLPDLAATFTISSLTRQGLEDIDFGAGTPVHFGPLT
SEVYCLFLPVIGDPRGATALVSVPQAAADSFERCCHDGLDDVDVEDKNQLPNIGDGMAS

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Molecular Function
GO Term transferase activity
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No