LOC_Os01g27880

Expression Profile

RGAP LOCUS ID LOC_Os01g27880
RAP-DB ID Os01g0376700
Function sucrose-phosphatase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 6

2) CELLO Prediction
localization Cytoplasmic
score 3.185

3) NUCPRED Prediction
localization Non Nuclear
score 0.04

4) Y-Loc Prediction
localization Cytoplasm
score 70
confidence value 0.35
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSPP
Function assigned as per literature Rice SPPs have an important function in differentiation and development at the shoot apex
Subcellular localization as per literature Endoplasmic reticulum
Cells used for localization experiment cultured plant cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 19688213
Reference of localization https://link.springer.com/article/10.1007%2Fs00299-009-0760-9
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.111
NLS score -0.47
Protein Sequence >LOC_Os01g27880.1 protein
MDKLSGSARLIIVSDLDHTMVDHHDEENLSLLRFGALWESVYCQDSLLVFSTGRSPTLYKELRKEKPMLTPDITIMSVGTEITYGEAMVPDDGWEEYLNN
KWDRNVVVEETAKFSELKLQPETEQRPHKVSFFVDKKSAQEVIKSLSGNMEKCGLDVKIIYSGGQDLDILPQGAGKGQALAYLLKKLSSCGKPPNNTLVC
GDSGNDAELFSIPGVHGVMVSNAQEELLQWYAENAKGNPKIIHATERCAAGIIEAIGHFKLGPSVSPRDVGFPYVKEDHIKPTDAVVKFYVLYEKWRRAE
VPKSDSVVQYFKNITHANGVIIQPSGLECSLHASVDALSSCYGEKQGKKYRTWVDRLFVSQSGSDSWLVRFDLWEAEGDARLCCLTSLALNVKPETPAGF
LITHVHKTWLKGYSSADEQSSKL

GO Analysis
1
GO Category Molecular Function
GO Term binding
2
GO Category Molecular Function
GO Term hydrolase activity
3
GO Category Biological Process
GO Term biosynthetic process
4
GO Category Biological Process
GO Term carbohydrate metabolic process
5
GO Category Biological Process
GO Term cellular process
6
GO Category Cellular comBiological Processonent
GO Term nucleus
7
GO Category Biological Process
GO Term metabolic process
8
GO Category Cellular comBiological Processonent
GO Term cellular_component
9
GO Category Molecular Function
GO Term catalytic activity
10
GO Category Cellular comBiological Processonent
GO Term cytoplasm
11
GO Category Biological Process
GO Term biological_process
12
GO Category Cellular comBiological Processonent
GO Term cytosol
Presence of Splice variants No