LOC_Os01g19850

Expression Profile

RGAP LOCUS ID LOC_Os01g19850
RAP-DB ID Os01g0304100
Function amino acid permease family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 7

2) CELLO Prediction
localization PlasmaMembrane
score 4.852

3) NUCPRED Prediction
localization Non Nuclear
score 0.1

4) Y-Loc Prediction
localization Cytoplasm
score 94
confidence value 0.55
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCCC2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.095
NLS score -0.47
Protein Sequence >LOC_Os01g19850.1 protein
METWLGCFYSKEKDLSDRGQWLNVGGEEPVVSYYFSPATGTGTRRRWRLEASAVGLGREETETKLDTMMGVFVPCLQNILGIIYYIRFTWIVGMGGVWQS
LVLVAFCGSCTFLTTISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGAMYVLGAVETFLDAVPSAEFFQESVTVVTNTFVNGTAAGN
ATTISTPNLHDLQVYGIIVTILLCFIVFGGVKIINKVAPAFLIPVLFSILCIYIGVFIAPRPNASKWITGLSITTLKDNWSSDYQRTNNAGVPDPNGALL
GLYFPAVTGIMAGSNRSASLKDTQRSIPIGTLHATISTTMMYLLSVFLFGALSTREGLLTDRLLCAAVAWPSPAVVYAVIMFMISWTFTVVSLALASLIY
YYVSLKGKAGDWGDGFKSAYFQLALRSLRSMGANQVHPKNWYPIPLIFCRPWGKLPEDVPCHPKLADFANCMKKKGRGMSIFVSIIDGDYHESAEDAKTA
CRQLSAYIDYRRCEGVAEIIVAPSTSIGFRSIVQTMGLGNLKPNIVVMRYPEIWRRENLTQIPSTFVSIINDCITANKAVVIVKGLDEWPNEYQRQYGTI
DLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEEDTEAEELKADVKKFLYDLRMQADVIVVTVKSWEADPDRSGGSKKDDPEVYRSAQSRIRTYIS
QLKEAAERERRPLMEGGKQVVVDEQKVEKFLYTMLKLNATILRHSRMAVVVLVSLPPPPLNHLAYCYMEYMDLLVENIPRILIVRGYRRDVVTLFT

GO Analysis
1
GO Category Biological Process
GO Term transport
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term transporter activity
4
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No