LOC_Os01g16970

Expression Profile

RGAP LOCUS ID LOC_Os01g16970
RAP-DB ID Os01g0276800
Function glucosidase II beta subunit-like domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization vacu
score 6

2) CELLO Prediction
localization Nuclear
score 3.899

3) NUCPRED Prediction
localization Non Nuclear
score 0.54

4) Y-Loc Prediction
localization Nuclear
score 51.19
confidence value 0.01
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsGAS2
Function assigned as per literature GAS2 is an important regulator between autophagy and PCD in rice
Subcellular localization as per literature Endoplasmic reticulum
Cells used for localization experiment Rice mesophyll protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 27538481
Reference of localization https://www.nature.com/articles/srep31764
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 1
Basic residues % 0.137
NLS score 0.02
Protein Sequence >LOC_Os01g16970.1 protein
MGLHAILLLLLLRISASAAASRPPLDTLGIPPQDEAYFRGGVIRCRDGSGRFARDKLNDDFCDCPDGTDEPGTSACPEGKFYCQNAGHSPITIFSSRVND
GICDCCDGSDEYDSNVTCKNTCWEAGKAARDKLKKKVATYKSGVVIRNQEIQKAKVAFAKDEAELAKLKGEEKILQGLVDKLTEQKKLIEKAEEEERLRK
EKEEKRMKEEAEKQAADEKKASDASQEVDSQENHETVQEDESKVAEHHDGHATSHDNHTPESESSVEQHDPESQDDISIKAAPADESPPEETSAAPTKEQ
ESTPADSEGLSREELGRLVASRWTGEKVDEVSKDDKNEHEAEHDMPEHSEETHEDESDVPESAEDSYAGYHSEVEDDRHKYDDEDFSHESDDEYVDDHDE
HVASYKSDDDQKGDDHSDFTASGQASWLDKIQQTVQNVLRTFNFFKTPVDLSEASRVRKEYDDASSKLSKIQSRISTLTDKLKHDFGKEKEFYYFYDQCF
ESKEGKYVYKVCPFKKASQVEGHSTTSLGRWDKFEESYRVMQFSNGDRCWNGPDRSLKVRLRCGLNNELNGVDEPSRCEYVAVLSTPALCDEQKLKELEQ
KLKASSNQRDHDEL

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Biological Process
GO Term response to stress
3
GO Category Biological Process
GO Term response to biotic stimulus
4
GO Category Molecular Function
GO Term protein binding
Presence of Splice variants YES