LOC_Os01g16600

Expression Profile

RGAP LOCUS ID LOC_Os01g16600
RAP-DB ID Os01g0272600
Function expressed protein

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 9.5

2) CELLO Prediction
localization Mitochondrial
score 2.284

3) NUCPRED Prediction
localization Non Nuclear
score 0.11

4) Y-Loc Prediction
localization Chloroplast
score 5
confidence value 0.39
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsRDN
Function assigned as per literature RDN1 arabinosylates MtCLE12, and this modification is necessary for the transport and/or reception of the AON signal by the SUNN kinase
Subcellular localization as per literature Golgi/endosomal system
Cells used for localization experiment tobacco cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 28592666
Reference of localization http://www.plantphysiol.org/content/174/4/2445.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.118
NLS score -0.22
Protein Sequence >LOC_Os01g16600.1 protein
MNAAARKAAAAARLPAAVLVVVAVGAFLISYNLLAIVLRGGGGAATGAGRERDPVVAMPGWMRAAGSAGGGRRRPFHVALTATDAAYSRWQCRVMYYWYK
RMQARPEGADMGGFTRVLHSGKPDALMGEIPTFVVDPLPAGKDHGYVVLNRPWAFVQWLEKAKIEEEYILMAEPDHIFVRPLPNLARDDPAAFPFFYITP
SEHESVLRKYYPKERGPVTNIDPIGNSPVIIKKIQLEKIAPTWMNVSIQMKEDQETDKAFGWVLEMYAYAVASALHGVQHILRKDFMIQPPFDTKLGNTF
IIHFTYGCDYTLKGVLTYGKIGEWRFDKRAYQDRPPPRNLTLPPPGVPESVVTLVKMVNEATANLPGWDDGR

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Molecular Function
GO Term molecular_function
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No