LOC_Os01g16530

Expression Profile

RGAP LOCUS ID LOC_Os01g16530
RAP-DB ID Os01g0271400
Function OsClp1 - Putative Clp protease homologue, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 8

2) CELLO Prediction
localization Chloroplast
score 2.661

3) NUCPRED Prediction
localization Non Nuclear
score 0.1

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.59
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) CLPR4
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.117
NLS score -0.22
Protein Sequence >LOC_Os01g16530.1 protein
MEAAAAFSPPRVSPDARAMFATLPASPSPHLRLAARPRALSASAPTTAAVAATKQRFLAPPRPDPAAPGGCGGGGARDVVAMVVPFLRGTAWQQPPPDLA
SFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYDDAEKPIYLYINSTGTTKNGEKLGYETEAFAIYDAMRYVKVPIFTLCVGNAWGEAALLLAAGAKGNRA
ALPSSTIMIKQPIGRFQGQATDVDIARKEIRNVKIEMIKLLSRHIGKSVEEIAQDIKRPKYFSPSEAVDYGIIDKVLYNEKSQEDGGVVSELKRSNLI

GO Analysis
1
GO Category Molecular Function
GO Term hydrolase activity
2
GO Category Biological Process
GO Term protein metabolic process
3
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No