LOC_Os01g16180

Expression Profile

RGAP LOCUS ID LOC_Os01g16180
RAP-DB ID Os01g0267100
Function MT-A70 domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 11

2) CELLO Prediction
localization Nuclear
score 3.716

3) NUCPRED Prediction
localization Non Nuclear
score 0.63

4) Y-Loc Prediction
localization Nuclear
score 100
confidence value 0.99
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsMTA1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 1
Basic residues % 0.139
NLS score 0.02
Protein Sequence >LOC_Os01g16180.1 protein
MFLQLADYHLRMDSRSPKIPRRSPDSKDKDSDRNKERDAKNDWDSSRAYGSETDCKEEMCDSNKRKGLTMGEIVVDNSRSVDSCHETELHVLRDDRQDKS
VEIKDILHDGVAKSDYAQRQIDLDSERRNGTGDNSRVDVLRDDKLDSGRDRNWSDRTREPEGSKDYVRNRQWQDSKEANDSEWKNAHERLDGGSFHGRAG
YRRDSRGRSESIRGSSTYGGRYDSSDSIEIRPNNNLDFGREGSVSGRRYDVGAHRDATPGTNGDKSANPEADQSGSTSTISQFPQHGPKGDRSSRGRGRP
NSRDSQRVGGTLPIMPPPFGPLGLPPGPMQHIGPNIPHSPGPLLPGVFVPPFPGPLVWPGARGVDVNMLSVPPNLPIPPVAAEHRFAPSMGAGPGHNIHL
NQIGSGIGAPTNVSGLSFHQLGTQSREMAHDKPPAGGGWTPHRNSGPTRKAPSRGEQNDYSQNFVDTGMRPQNFIRELDLTSVAEDYPKLRELIQRKDEI
VANSASPPMYYKCDLRQHVLSPEFFGTKFDVILVDPPWEEYVHRAPGITDHIEYWNAEEIMNLKIEAIADTPSFVFLWVGDGVGLEQGRQCLKKWGFRRC
EDVCWVKTNKKNATPSLRHDSHTILQHSKEHCLMGIKGTVRRSTDGHVIHANIDTDIIIAEEPTDGSTKKPEDMYRIIEHFALGKRRLELFGEDHNIRPG
WLTLGKGLSYSNFNKEAYIKNFADKDGKVWQGGGGRNPPPEAPHLVVTTPEIEGLRPKSPPQKN

GO Analysis
1
GO Category Molecular Function
GO Term transferase activity
2
GO Category Cellular comBiological Processonent
GO Term cytosol
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Biological Process
GO Term cellular process
5
GO Category Biological Process
GO Term reproduction
6
GO Category Biological Process
GO Term post-embryonic development
7
GO Category Biological Process
GO Term embryo development
8
GO Category Molecular Function
GO Term nucleic acid binding
Presence of Splice variants YES