LOC_Os01g16020

Expression Profile

RGAP LOCUS ID LOC_Os01g16020
RAP-DB ID Os01g0265000
Function FAD binding domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 14

2) CELLO Prediction
localization Chloroplast
score 2.395

3) NUCPRED Prediction
localization Non Nuclear
score 0.23

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.84
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsGGR2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.129
NLS score 0.21
Protein Sequence >LOC_Os01g16020.1 protein
MAAAVAAAACHSPARLVVTCSSSATPAPPRRPLRVAVVGGGPAGASAAEALASAGAQAFLLERNPSGAKPCGGAIPLCMLDEFAIPRDLVDRRVTRMRVL
SPSNLAADFSRALPPGAHIPMLRREVLDSFLRRRAADAGATLVPGLVTSLSLPADPATDPYLVHYISSDSGGPSSSRCVLEVDAVIGADGANSRVAREVG
AGDYSTAIAFQERIRLPDEAMAYYDDLAEMYVGGDVSPDFYGWVFPKCDHVAVGTGTVAAKPEIKRLQSGIRARAAGKVAGGRVVRVEAHPIPEHPRPRR
VVGRVALVGDAAGYVTRCSGEGIYFAARSGRLCGRAMADEWRLTGAVTEAGIRAGYLRRWDDEFRPTFRFLDLLQRVFYGGNAGREALVEMCADEHVQRR
TFDSYLHKRMAPAEPWGDLRLLWRTAAAMVRCGVLGREVERLRRLEQQAADQVLLRH

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Cellular comBiological Processonent
GO Term plastid
3
GO Category Cellular comBiological Processonent
GO Term thylakoid
4
GO Category Molecular Function
GO Term protein binding
5
GO Category Biological Process
GO Term metabolic process
6
GO Category Molecular Function
GO Term catalytic activity
7
GO Category Biological Process
GO Term biosynthetic process
8
GO Category Biological Process
GO Term cellular process
Presence of Splice variants No