LOC_Os01g14950

Expression Profile

RGAP LOCUS ID LOC_Os01g14950
RAP-DB ID Os01g0253300
Function importin subunit alpha, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 6

2) CELLO Prediction
localization Cytoplasmic
score 2.904

3) NUCPRED Prediction
localization Non Nuclear
score 0.43

4) Y-Loc Prediction
localization Nuclear
score 93.68
confidence value 0.2
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) alpha1a
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 0
Number of Bipartite 2
Basic residues % 0.105
NLS score 1.14
Protein Sequence >LOC_Os01g14950.1 protein
MSLRPSERVEVRRNRYKVAVDAEEGRRRREDNMVEIRKSRREESLLKKRREGLQAQAPVPASAATGVDKKLESLPAMIGGVYSDDNNLQLEATTQFRKLL
SIERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDLVLANG
ALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQTRPALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSV
LIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGG
SHDQIKYLVSEGCIKPLCDLLICPDIRIVTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENLQSHDNNEIYEKAVKILEAYWMDEEDDT
MGATTVAAPQGATFDFGQGGGAAQFK

GO Analysis
1
GO Category Biological Process
GO Term transport
2
GO Category Biological Process
GO Term cellular process
3
GO Category Cellular comBiological Processonent
GO Term cellular_component
4
GO Category Cellular comBiological Processonent
GO Term nucleolus
5
GO Category Molecular Function
GO Term transporter activity
6
GO Category Cellular comBiological Processonent
GO Term cytosol
7
GO Category Molecular Function
GO Term binding
Presence of Splice variants No