LOC_Os01g14920

Expression Profile

RGAP LOCUS ID LOC_Os01g14920
RAP-DB ID Os01g0252900
Function zinc knuckle family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 12.5

2) CELLO Prediction
localization Nuclear
score 4.278

3) NUCPRED Prediction
localization Non Nuclear
score 0.75

4) Y-Loc Prediction
localization Nuclear
score 99.98
confidence value 0.98
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsZFP
Function assigned as per literature OsZFP is involved in root development via IAA pathway in rice
Subcellular localization as per literature Nucleus
Cells used for localization experiment Rice protoplasts
NUCLEAR or Not Nuclear NUCLEAR
PMID 28267270
Reference of localization https://onlinelibrary.wiley.com/doi/epdf/10.1111/jipb.12531
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.193
NLS score 0.27
Protein Sequence >LOC_Os01g14920.1 protein
MAREPSPEIDDELFNEVYGKAYSGPVATTTNNVTPRVNDEKRPLEREKSDEEDGPPDPNAVPTDFTSREAKVWEAKAKATERNWKKRKEEEMICKICGES
GHFTQGCPSTLGANRRNADFFERVPARDKQVRDLFTERTISQIEKDVGCKIKMDEKFLFVSGKDRLILAKGVDAVHKIIQEGKGKNTSSSPKRDRLRSPV
RTTSDIRPRHTDSRWSHSPRSAPRSQSKGYYNERPLDGRSHDDMPKFSKESPQGRALKHTRLIIVVSANIRSQAF

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Molecular Function
GO Term binding
3
GO Category Biological Process
GO Term biological_process
4
GO Category Molecular Function
GO Term nucleic acid binding
Presence of Splice variants No