LOC_Os01g14410

Expression Profile

RGAP LOCUS ID LOC_Os01g14410
RAP-DB ID Os01g0246400
Function early light-induced protein, chloroplast precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 13

2) CELLO Prediction
localization Chloroplast
score 2.514

3) NUCPRED Prediction
localization Non Nuclear
score 0.1

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.76
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) ELIP
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.079
NLS score 0.21
Protein Sequence >LOC_Os01g14410.1 protein
MAAATMALSSSFAVAAAAAGGAPWRGVVSAGRAAPRRRVALVVRAQSEPEVEPTKEETATSSSSPSPATTPTPSPAAAAPKAKPAASTKLWDVLAFSGPA
PERINGRLAMVGFVSALAVEASRGGGLLDQAGSWSGLAWFAATAAVLSAASLVPLLRGETAEARSGGVMSADAELWNGRFAMLGLVALAFTEFLTGSPLV
NV

GO Analysis
1
GO Category Biological Process
GO Term response to abiotic stimulus
2
GO Category Biological Process
GO Term response to stress
3
GO Category Molecular Function
GO Term binding
Presence of Splice variants No