| RGAP LOCUS ID |
LOC_Os01g13950 |
| RAP-DB ID |
Os01g0241400 |
| Function |
OsGrx_A1 - glutaredoxin subgroup III, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
chlo |
| score |
10 |
2) CELLO
Prediction
|
| localization |
Cytoplasmic |
| score |
1.005 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.22 |
4) Y-Loc
Prediction
|
| localization |
Nuclear |
| score |
57.52 |
| confidence value |
0.1 |
| Number Of Software Predicting Nucleus |
1 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
PHS9 |
| Function assigned as per literature |
PHS9 plays an important role in the regulation of rice PHS through the integration of ROS signaling and ABA signaling |
| Subcellular localization as per literature |
cytoplasm and nucleus |
| Cells used for localization experiment |
Rice protoplasts |
| NUCLEAR or Not Nuclear |
NUCLEAR |
| PMID |
31436865 |
| Reference of localization |
https://onlinelibrary.wiley.com/doi/pdf/10.1111/tpj.14501 |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
1 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.125 |
| NLS score |
-0.16 |
| Protein Sequence |
>LOC_Os01g13950.1 protein
MQGARSAAAMAAAAADEEREVRRAVEEKPVVVVGRRGCCMAHVARRLLLGQGANPAVLEVGDDADPAALVDAALQARRRKDGGDKAAAGDGGGGAAVAFP
AVFIGGRLVGGLDRLMAMHMAGELVPVLKQAGALWL |
GO Analysis |
| 1 |
| GO Category |
Biological Process |
| GO Term |
biological_process |
|
| 2 |
| GO Category |
Molecular Function |
| GO Term |
catalytic activity |
|
| 3 |
| GO Category |
Molecular Function |
| GO Term |
molecular_function |
|
| 4 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cellular_component |
|
| 5 |
| GO Category |
Biological Process |
| GO Term |
signal transduction |
|
| 6 |
| GO Category |
Biological Process |
| GO Term |
response to endogenous stimulus |
|
| 7 |
| GO Category |
Molecular Function |
| GO Term |
protein binding |
|
| 8 |
| GO Category |
Biological Process |
| GO Term |
metabolic process |
|
| Presence of Splice variants |
No |
