LOC_Os01g12900

Expression Profile

RGAP LOCUS ID LOC_Os01g12900
RAP-DB ID Os01g0229400
Function ras-related protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 8

2) CELLO Prediction
localization Nuclear
score 1.652

3) NUCPRED Prediction
localization Non Nuclear
score 0.24

4) Y-Loc Prediction
localization Cytoplasm
score 92
confidence value 0.53
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsRac1
Function assigned as per literature OsRac1 has a general role in disease resistance of rice
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment Rice protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 11149940
Reference of localization http://www.pnas.org/content/98/2/759.short
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.173
NLS score -0.47
Protein Sequence >LOC_Os01g12900.1 protein
MPELRRFAPGVPVVLVGTKLDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQPPRHKDVTRKKLQSSSNRPVR
RYFCGSACFA

GO Analysis
1
GO Category Biological Process
GO Term signal transduction
2
GO Category Molecular Function
GO Term nucleotide binding
3
GO Category Biological Process
GO Term transport
4
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants YES