LOC_Os01g12690

Expression Profile

RGAP LOCUS ID LOC_Os01g12690
RAP-DB ID Os01g0226700
Function plant-specific domain TIGR01568 family protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 13

2) CELLO Prediction
localization Nuclear
score 4.277

3) NUCPRED Prediction
localization Non Nuclear
score 0.84

4) Y-Loc Prediction
localization Nuclear
score 70.5
confidence value 0.11
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category OFP

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OFP1
Function assigned as per literature OFP1 positively regulates BR responses to modulate plant architecture and grain morphology
Subcellular localization as per literature Cytoplasm and nucleus
Cells used for localization experiment Rice protoplasts
NUCLEAR or Not Nuclear NUCLEAR
PMID 29021808
Reference of localization https://www.frontiersin.org/articles/10.3389/fpls.2017.01698/full
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 6
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.157
NLS score 1.71
Protein Sequence >LOC_Os01g12690.1 protein
MAMDHRGGGGGGGRSSSRLRDRLARMFRPGALLRSTCNNHATASTSSSSSSAAAAAGGVVTASACSSSRALLAADAAAAVDYCGRESFLASSRRDYSDAA
ATALVGRTESFSTALDRLHRRGGGTPLPPSRFSVDASPKKEDAAAAAAAAKEKEMTTAAARDVQGFHYHHHRRHGSLGGGGGCGKSDKARRLLSNPYGFT
TSDDADTDGDDVFSSDADDRGGRVVAGGGGGAKKGETEAFFSSSRSFSSDSSEFYTKKKKRNKPKKKSPSTASSKAAPPPPPPPPPTTRHQIRRKRRAAR
ASSCVDTCGVRDGFRPVVSAAEEQVRRGFAVVKRSRDPYADFRSSMVEMVVGRQLFGAAELERLLRSYLSLNAPRHHPVILQAFSDIWVVLHGG

GO Analysis
1
GO Category Biological Process
GO Term biological_process
2
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No