LOC_Os01g12210

Expression Profile

RGAP LOCUS ID LOC_Os01g12210
RAP-DB ID Os01g0221600
Function aluminum-activated malate transporter, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 12

2) CELLO Prediction
localization PlasmaMembrane
score 3.961

3) NUCPRED Prediction
localization Non Nuclear
score 0.17

4) Y-Loc Prediction
localization Chloroplast
score 4
confidence value 0.11
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsALMT4
Function assigned as per literature Increased OsALMT4 expression affected malate efflux and compartmentation within the tissues which increased Mn concentrations in the apoplast of leaves and induced the toxicity symptoms
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment leek (Allium porrum L.) and tobacco (Nicotiana benthamiana L.) cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 29101278
Reference of localization http://www.plantphysiol.org/content/early/2017/11/03/pp.17.01142
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.111
NLS score -0.22
Protein Sequence >LOC_Os01g12210.1 protein
MNGKKGSIRIDICLKPKDVVPEDAKKPISEEGLSPRKWLHDVWDFARQDTNRVTFALKVGLACLLVSLLILFRAPYDIFGANIIWSILTVAIMFEYTVGA
TFNRGFNRAVGSVFAGVFAVVVIQVAMSSGHIAEPYIIGFSIFLIGAVTSFMKLWPSLVPYEYGFRVILFTYCLIIVSGYRMGNPIRTAMDRLYSIAIGA
LIAVLVNVFICPIWAGEQLHRELVNSFNSLADSLEECVKKYLSDDGSEHPEFSKTVMDNFPDEPAFRKCRATLNSSAKFDSLANSAKWEPPHGRFKHFFY
PWAEYVKVGNVLRHCAYEVMALHGCVHSEIQAPYNLRCAFKSEILDATKQAAELLRGLAKDLNNMKWSLQTSLLKHVHVSTERLQHSIDLHSYLFTASQE
DNYAKPQLKISRVVSFKNQSGEPESKTTETRTPMAMEVESYHEMMKRQQRKLHSWPSREVDDFEDDENVVSDLIPRMRALESTTALSLATFTSLLIEFVA
RLDHLVEAAERLATMARFKQQIAN

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Cellular comBiological Processonent
GO Term vacuole
3
GO Category Biological Process
GO Term transport
4
GO Category Molecular Function
GO Term transporter activity
5
GO Category Biological Process
GO Term cellular process
Presence of Splice variants No