LOC_Os01g11054

Expression Profile

RGAP LOCUS ID LOC_Os01g11054
RAP-DB ID Os01g0208700
Function phosphoenolpyruvate carboxylase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 11

2) CELLO Prediction
localization Cytoplasmic
score 2.531

3) NUCPRED Prediction
localization Non Nuclear
score 0.68

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.35
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) Osppc4
Function assigned as per literature Osppc4 plays a crucial role in ammonium assimilation in rice plants
Subcellular localization as per literature Chloroplast
Cells used for localization experiment Guard cells of dayflower epidermis
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 20194759
Reference of localization http://www.pnas.org/content/107/11/5226.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 2
Number of Bipartite 0
Basic residues % 0.127
NLS score 0.64
Protein Sequence >LOC_Os01g11054.1 protein
MISLHSAPFTLLVKLPGRRRSGLTPPRCAVRGAGNVSSAAVREMAVAEGRRQHEYSIDARLRQLAPEKVSADDRLVDYETLLVARFLDILEDLHGGDFRQ
VVEDCLRLSGEYQSEGDPARLGELGGLLTSLDVGDAIMVASSFSHMLNLANLAEEIQMVYRKKAEASRRGDFVDEASAPTESDIDETFQRLVRGLGKSPR
EVFDALRSQTIDLVLTAHPTQSVRRSLLQKHASIRSCLTQLCGEGISDNEEQEIDEALQREILAAFKTDEIRRTPPTPQDEMRAGMSYFHDTIWNGVPKF
LRRVDTALKNIGIDERLPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANMYFSKMADLMFELSMWRCNDELRARANELHRKSSRKYAKYYI
EFWKKISPGEPYRIILGDVRDKLYNTCERARQILSKGISSIPEDQTYTNVEQFLEPLELCYRSLCDCGDKLIADGRLLDLMRQVSTFGLSLVKLDIRQES
ERHTDAMDAITTHLGIGSYREWPEERRQEWLVSELRGRRPLFGPDLPQSEEVADVLGAFRVIAELPADSFGAYIISMATAPSDVLAVELLQRECGVKKPL
RVVPLFEKLADLQQARATMELLFSVDWYKERIDGKQEIMIGYSDSGKDAGRLSAAWQLYKAQEEIVGVAERHGVKLTIFHGRGGTVGRGGGPSHLAILSQ
PPNTVNGSLRVTVQGEVIEKSFGEENLCFRTLQRFTAATLEHGMNPPVSPKPEWRRLLDDMATVATDEYRSIVFQEPRFVEYFRAATPETEYGRMNIGSR
PSKRKPGGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFRHAMQQSDAGGGLATLREMYDEWPFFRVTIDLLEMVFAKGDPGIAALYDELLVPDDLRPFG
EQLRANYVETQRLLLQVAGHKDLLESDPYLRQRLMLRDSYITALNVCQAYTLKRIRDGGFRPETRPPLSKELLGSSAVAEKLVKLNPNSEYDPGLEDTLI
LTMKGIAAGMQNTG

GO Analysis
1
GO Category Biological Process
GO Term generation of precursor metabolites and energy
2
GO Category Biological Process
GO Term catabolic process
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Molecular Function
GO Term catalytic activity
5
GO Category Cellular comBiological Processonent
GO Term cytosol
Presence of Splice variants YES