LOC_Os01g10490
| RGAP LOCUS ID | LOC_Os01g10490 | ||||
| RAP-DB ID | Os01g0201600 | ||||
| Function | keratin, type I cytoskeletal 9, putative, expressed | ||||
Sub-cellular Localization Predictions |
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1) WoLF-PSORT Prediction |
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| localization | chlo | ||||
| score | 7 | ||||
2) CELLO Prediction |
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| localization | Nuclear | ||||
| score | 2.753 | ||||
3) NUCPRED Prediction |
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| localization | Non Nuclear | ||||
| score | 0.12 | ||||
4) Y-Loc Prediction |
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| localization | Secreted pathw | ||||
| score | |||||
| confidence value | 0.96 | ||||
| Number Of Software Predicting Nucleus | 1 | ||||
| Seed Specific | No | ||||
| Transcription factor category | |||||
Experimental evidence for subcellular localization |
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| Published gene name (updated 1 January 2020) | OsGAE1 | ||||
| Function assigned as per literature | OsGAE1 is involved in gibberellin-regulated growth and development of rice | ||||
| Subcellular localization as per literature | Membrane fraction of plant cells | ||||
| Cells used for localization experiment | Rice leaf sheath | ||||
| NUCLEAR or Not Nuclear | NOT NUCLEAR | ||||
| PMID | 16915516 | ||||
| Reference of localization | https://link.springer.com/article/10.1007%2Fs11103-006-9030-1 | ||||
| Is Subcellular localization evidence by author available ? | No | ||||
Sequence Analysis |
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| Number of PAT4 | 0 | ||||
| Number of PAT7 | 0 | ||||
| Number of Bipartite | 0 | ||||
| Basic residues % | 0.053 | ||||
| NLS score | -0.47 | ||||
| Protein Sequence | >LOC_Os01g10490.1 protein MAAARMKNTTMGCAFLLAAFAMAAAFVPVAESRTTPVEKTTTTQAEDGVKKPDCVPAFDPRSFPGHGGTTTPTPIPGHHGGGGSSGTTPSHGGGPSGGAL PSPSHGGAAPSHGGGYGASPPVTPSPGGGYGGGSPAPSHGGGAYGSSPSTPSGGGSSPTPSHGGGAYGGGGAPATPASHDGHGLIPTTPGTCDYWRSHPM EMWSALGRWPSSVGHFFGSGSGGAGTGMSIQDALANTRGDGAGELMREGAAALLNSMTRSGFPYTAEQVRDAFAAAAGGGSDGAAAAQAAAFKKANEGGR A |
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GO Analysis |
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| 1 |
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| Presence of Splice variants | No | ||||