LOC_Os01g10040

Expression Profile

RGAP LOCUS ID LOC_Os01g10040
RAP-DB ID Os01g0197100
Function cytochrome P450, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 10

2) CELLO Prediction
localization PlasmaMembrane
score 1.588

3) NUCPRED Prediction
localization Non Nuclear
score 0.56

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.21
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) D2|CYP90D2|SMG11
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 4
Number of PAT7 1
Number of Bipartite 2
Basic residues % 0.133
NLS score 2.03
Protein Sequence >LOC_Os01g10040.1 protein
MVSAAAGWAAPAFAVAAVVIWVVLCSELLRRRRRGAGSGKGDAAAAARLPPGSFGWPVVGETLEFVSCAYSPRPEAFVDKRRKLHGSAVFRSHLFGSATV
VTADAEVSRFVLQSDARAFVPWYPRSLTELMGKSSILLINGALQRRVHGLVGAFFKSSHLKSQLTADMRRRLSPALSSFPDSSLLHVQHLAKSVVFEILV
RGLIGLEAGEEMQQLKQQFQEFIVGLMSLPIKLPGTRLYRSLQAKKKMARLIQRIIREKRARRAAASPPRDAIDVLIGDGSDELTDELISDNMIDLMIPA
EDSVPVLITLAVKFLSECPLALHQLEEENIQLKRRKTDMGETLQWTDYMSLSFTQHVITETLRLGNIIGGIMRKAVRDVEVKGHLIPKGWCVFVYFRSVH
LDDTLYDEPYKFNPWRWKEKDMSNGSFTPFGGGQRLCPGLDLARLEASIFLHHLVTSFRWVAEEDHIVNFPTVRLKRGMPIRVTAKEDDD

GO Analysis
1
GO Category Molecular Function
GO Term catalytic activity
2
GO Category Biological Process
GO Term biosynthetic process
3
GO Category Biological Process
GO Term lipid metabolic process
4
GO Category Biological Process
GO Term flower development
5
GO Category Biological Process
GO Term metabolic process
6
GO Category Molecular Function
GO Term oxygen binding
7
GO Category Cellular comBiological Processonent
GO Term cell
8
GO Category Biological Process
GO Term multicellular organismal development
Presence of Splice variants YES