LOC_Os01g09850

Expression Profile

RGAP LOCUS ID LOC_Os01g09850
RAP-DB ID Os01g0195000
Function ZOS1-04 - C2H2 zinc finger protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 14

2) CELLO Prediction
localization Nuclear
score 4.742

3) NUCPRED Prediction
localization Nuclear
score 0.86

4) Y-Loc Prediction
localization Nuclear
score 99.54
confidence value 0.67
Number Of Software Predicting Nucleus 4
Seed Specific No
Transcription factor category C2H2

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsIDD2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 3
Number of Bipartite 0
Basic residues % 0.099
NLS score 0.96
Protein Sequence >LOC_Os01g09850.1 protein
MMLKDLAEIQQQQLLAAAEENMSNLTSASGDQASVSSHPAPPPAKKKRSLPGNPDPEAEVIALSPRTLMATNRYVCEICGKGFQRDQNLQLHRRGHNLPW
KLKQRNPKEVVRKKVYVCPEAGCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKRYAVHSDWKAHSKVCGTREYRCDCGTLFSRRDSFITHRAFCD
ALAEESARAVTAAAAVAGQQQHGGGMLFSQVADVLDHQAAMAMGGHGLMQELCLKREQQQQQQQFAPSWLTAQQQQQQLEAMAGAGNPAAMYGSARLDQE
FIGSSTPESGGAQQAGLSFGFSSTSSAPPHPAASSAHMSATALLQKAAQMGATLSRPSSHAHMAAAAAASTHNSSSSAATTNAPPPPPTSNVSSTCVGAG
GYGLAFEASHFIAADESSRGARSDRDTGNGVAGAGNDGLTRDFLGLRAFSHGNIMSMAGFDPCMSTTSASSAAPYDHHHHSNKPWHS

GO Analysis
1
GO Category Biological Process
GO Term biosynthetic process
2
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
3
GO Category Molecular Function
GO Term binding
4
GO Category Cellular comBiological Processonent
GO Term intracellular
5
GO Category Molecular Function
GO Term sequence-specific DNA binding transcription factor activity
6
GO Category Molecular Function
GO Term nucleic acid binding
Presence of Splice variants YES