LOC_Os01g09760

Expression Profile

RGAP LOCUS ID LOC_Os01g09760
RAP-DB ID Os01g0193900
Function DIRP family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 10

2) CELLO Prediction
localization Nuclear
score 4.643

3) NUCPRED Prediction
localization Nuclear
score 0.96

4) Y-Loc Prediction
localization Nuclear
score 100
confidence value 0.95
Number Of Software Predicting Nucleus 4
Seed Specific No
Transcription factor category MYB_related

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsALYL1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 5
Number of PAT7 2
Number of Bipartite 0
Basic residues % 0.143
NLS score 1.55
Protein Sequence >LOC_Os01g09760.1 protein
MGPAKGSRTITKITIKGYDDRQHDEDPNSSSKVKLKKRKMSDLGPQWSKDELMRFYEAYRRHGKNWKKVSASVGGKSADTVEALYSVHRTFLSLPEREGT
AMGFVALVTGHHNVSQDESKSHKGSDQTVRASGKVRKREATGQKEKEAPHAHRSYHERRTSGLSSFKKRYYGELVKNIPRHPSGKRTPRVPVIFPADMNV
AHAGIPETENAINCTKKASGATNNELECSSHGSPGISESAKFVQGQTFLEAKGTGSLKKRRIEQSMEQGQTIKDEHKTAMVAKEGNDLTEYQRLTNLFSP
DEMLVLDVLESLVTVPSKISEPKINIPSGTLGRDDSALSHRREEGPSVKRSKQGKQVGECSASKTRNKRRKKLIAEEVPTEGVTSNHLDLPEERQVDATE
CALNSDLERGTVDLPESTANISTKIPDLPSQLKPEINMSRRSKRKSKSPCGSKYVVCNGADNLQARRLQHCLSSESLRRWCTYEWFYSAVDYPWFMDNEF
VNYLNFANLSHLSRLTRSEWSTIRSSLGKPRRFSDHFLAAEKDKLENYRKKVRQYYALLSEDSWDSLPPDLARPFSIGQQVIVRHPSTRELCDGKVVMME
QDRYNVQFDRPDLGVDEVKDTDCMPVNWLDNLPDDLKKRSFLSNNSHNRVEVEQIPKFTSKENWDHISGEAEPSKTMHITSDEQVEIAVDIERLSNKSTS
GNCGPLQPLQSVDDNVRSRGLSEHRNGHNDELDSYITSFVQMSLAQAKQMVDEAMKEISENGKSSLEETGISNEATDCTGPEPESAANSELPRNLIFNCI
ATLLAIKHFSEGRHPPPNIAGVLERACLMLRPSCAENLPIYNEIENFIAVIKNQILALVPSASSNARLPMYM

GO Analysis
1
GO Category Molecular Function
GO Term DNA binding
2
GO Category Molecular Function
GO Term protein binding
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No