LOC_Os01g08860
| RGAP LOCUS ID | LOC_Os01g08860 | ||||
| RAP-DB ID | Os01g0184100 | ||||
| Function | hsp20/alpha crystallin family protein, putative, expressed | ||||
Sub-cellular Localization Predictions |
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1) WoLF-PSORT Prediction |
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| localization | cyto | ||||
| score | 9 | ||||
2) CELLO Prediction |
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| localization | Cytoplasmic | ||||
| score | 3.319 | ||||
3) NUCPRED Prediction |
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| localization | Non Nuclear | ||||
| score | 0.05 | ||||
4) Y-Loc Prediction |
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| localization | Cytoplasm | ||||
| score | 94 | ||||
| confidence value | 0.58 | ||||
| Number Of Software Predicting Nucleus | 0 | ||||
| Seed Specific | No | ||||
| Transcription factor category | |||||
Experimental evidence for subcellular localization |
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| Published gene name (updated 1 January 2020) | OsHSP18.2|Oshsp18.0-CII | ||||
| Function assigned as per literature | |||||
| Subcellular localization as per literature | NA | ||||
| Cells used for localization experiment | |||||
| NUCLEAR or Not Nuclear | |||||
| PMID | |||||
| Reference of localization | |||||
| Is Subcellular localization evidence by author available ? | No | ||||
Sequence Analysis |
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| Number of PAT4 | 1 | ||||
| Number of PAT7 | 2 | ||||
| Number of Bipartite | 0 | ||||
| Basic residues % | 0.151 | ||||
| NLS score | 0.47 | ||||
| Protein Sequence | >LOC_Os01g08860.1 protein MESAMFGLETPLMTALQHLLDIPDGEGGAAGKQGATGGPTRAYVRDARAMAATPADVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGE EEKEESCKYLRMERRMGKFMRKFVLPDNADVDKISAVCQDGVLTVTVEKLPPPEPKKPKTIEVKVA |
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GO Analysis |
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| 1 |
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| 2 |
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| Presence of Splice variants | YES | ||||