LOC_Os01g08020

Expression Profile

RGAP LOCUS ID LOC_Os01g08020
RAP-DB ID Os01g0175600
Function boron transporter protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 9

2) CELLO Prediction
localization PlasmaMembrane
score 4.815

3) NUCPRED Prediction
localization Non Nuclear
score 0.06

4) Y-Loc Prediction
localization Chloroplast
score 5
confidence value 0.18
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) BOR2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.088
NLS score -0.22
Protein Sequence >LOC_Os01g08020.1 protein
MDLLRTPFKGVVADIEGRVAWYKHDWVAGFRSGFRILAPTMYIFFASALPVIAFGAQLSRETNGILTTVETLASTALCGIIHSILGGQPLLIVGVAEPTI
IMYTYLYNFAKNQQALGERLYLAWAGWVCIWTALMLFLLAMFNASNVISRFTRVAGELFGMLITVLFLQQAIKGIIEEFKVPRDADHSSPIYQFQWLYVN
GLLGVIFSIGLLYTALRSRRARSWVYGQGWLRGFIADYGVPLMVIVWTAFSYTLPKDVPSGVPRRLFSPLPWESSSLQHWTVAKDLFSVPPAYIFAAILP
ALMVAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILVLGFMVLLCGLIGIPPSNGVLPQSPMHTRSLAVLKGQLLRKKMVQTANEGLMNRASSLEIYGK
IQGVFIEMDCEKNTDSVDKELKSLKDAMLQEGDKEGTLAEEFDPIKHIEAHLPVRVNEQRLSNLLQSLLVGACVGAMPVIKMIPTSVLWGYFAYMAIDSL
PGNQFWERIRLIFIPSSRRYKVLEGPHASFMESVPSKTITVFTIFQLVYLLICFGITWIPIAGILFPLPFFLMILIRQHVLPKFFEPNDLRELDAAEYEE
LEGVHHDHTLEDGASDSESCGSRDDAEILDELTTNRGELKHRTFNHREERHPQAHTKAVQPRCGDTENWSEC

GO Analysis
1
GO Category Biological Process
GO Term transport
2
GO Category Biological Process
GO Term cellular process
3
GO Category Biological Process
GO Term response to extracellular stimulus
4
GO Category Biological Process
GO Term cell communication
5
GO Category Molecular Function
GO Term transporter activity
6
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No