LOC_Os01g04190

Expression Profile

RGAP LOCUS ID LOC_Os01g04190
RAP-DB ID Os01g0133400
Function transporter family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 9

2) CELLO Prediction
localization PlasmaMembrane
score 4.062

3) NUCPRED Prediction
localization Non Nuclear
score 0.04

4) Y-Loc Prediction
localization Chloroplast
score 7
confidence value 0.08
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPGLCT
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.084
NLS score -0.47
Protein Sequence >LOC_Os01g04190.1 protein
MAGTGASVKMIRCVVKCGGQQQHVVVAARGDRKSPAIAAPPPATVRMPGRVLCCGMRSRGADLAGVEMAAGPQPQGGVSGLFRGPRSSPRYSRVRATATV
DPEDIPLEKVQAKSSGSVLPYVGVACLGAILFGYHLGVVNGALEYLAKDLGISENAVLQGWVVSTTLAGATAGSFTGGALADKFGRTRTFILDAIPLAVG
AFLSATAHDVRTMIIGRLLAGIGIGISSALVPLYISEISPTEIRGALGSVNQLFICIGILAALVAGLPLAGNPAWWRTMFGISIVPSILLALGMAVSPES
PRWLFQQGKLSQAETAIKKLYGREKVAEVMYDLKAASQGSSEPDAGWLDLFSKRYWKVVSVGAAMFLFQQLAGINAVVYYSTSVFRSAGIASDVAASALV
GAANVFGTMIASSLMDKQGRKSLLITSFSGMAASMLLLSLSFTWKALAPYSGPLAVAGTVLYVLSFALGAGPVPALLLPEIFASRIRAKAVALSLGMHWV
SNFFIGLYFLSVVNKFGISTVYLGFASVCALAVVYIAGNVVETKGRSLEEIERALSSAS

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Biological Process
GO Term transport
3
GO Category Biological Process
GO Term cellular process
4
GO Category Molecular Function
GO Term transporter activity
5
GO Category Biological Process
GO Term biological_process
6
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants YES