LOC_Os01g03914

Expression Profile

RGAP LOCUS ID LOC_Os01g03914
RAP-DB ID Os01g0130000
Function cation efflux family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 7

2) CELLO Prediction
localization PlasmaMembrane
score 3.034

3) NUCPRED Prediction
localization Non Nuclear
score 0.12

4) Y-Loc Prediction
localization Nuclear
score 66.56
confidence value 0.68
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsMTP9
Function assigned as per literature MTP9 is required for manganese translocation to the root stele and thereby manganese uptake in rice
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment Rice protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 27251715
Reference of localization https://www.nature.com/articles/nplants2015170
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.115
NLS score 0.06
Protein Sequence >LOC_Os01g03914.1 protein
MGSRGRRGGGERETETEEDETWKLRVGDDFTVPERFHRKPPFFSRIFPAGSHGKHRKIAKYYKKQENLLKDFSEMETMNEIGSLDQNAPTEEELRQMAKG
ERLAINLSNIINLILFIGKVLASVESLSMAVIASTLDSLLDLLSGFILWFTAHAMKKPNKYSYPIGKRRMQPVGIIVFASVMGTLGFQVLIESGRQLITN
EHQVFDHRKELWMIGSMSSVAVVKFFLMLYCRSFKNEIVRAYAQDHFFDVITNSVGLVSALLAVRYKWWMDPVGAILIAVYTITTWARTVVENVGTLIGR
SAPAEYLTKLTYLIWNHHEEIRHIDTVRAYTFGTHYFVEVDIVLPGDMPLSHAHDIGESLQEKLEQLPEVERAFVHVDFEFTHRPEHKAEV

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Biological Process
GO Term transport
3
GO Category Biological Process
GO Term cellular process
4
GO Category Molecular Function
GO Term transporter activity
Presence of Splice variants YES